Nanopore Sequencing in Ophthalmology
1 other identifier
observational
20
1 country
1
Brief Summary
In this pilot study, the feasibility of the Oxford Nanopore MinION to identify pathogens from vitrectomy samples in eyes with endophthalmitis shall be assessed. The MinION is a low cost commercially available device for DNA/ RNA analysis that, in studies, has been used for pathogen determination in various infectious diseases as well as for the genetic characterization of hematologic tumors.
Trial Health
Trial Health Score
Automated assessment based on enrollment pace, timeline, and geographic reach
participants targeted
Target at below P25 for all trials
Started Apr 2022
Longer than P75 for all trials
1 active site
Health score is calculated from publicly available data and should be used for screening purposes only.
Trial Relationships
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Study Timeline
Key milestones and dates
First Submitted
Initial submission to the registry
April 22, 2022
CompletedStudy Start
First participant enrolled
April 22, 2022
CompletedFirst Posted
Study publicly available on registry
May 13, 2022
CompletedPrimary Completion
Last participant's last visit for primary outcome
December 1, 2026
ExpectedStudy Completion
Last participant's last visit for all outcomes
December 1, 2027
September 30, 2025
September 1, 2025
4.6 years
April 22, 2022
September 29, 2025
Conditions
Keywords
Outcome Measures
Primary Outcomes (1)
Pathogen detection
Pathogens detected by Nanopore sequencing versus microbiologic culture
In vitro analysis after vitrectomy for endophthalmitis. Start of analysis: Within the next working day after sample acquisition. Time for Nanopore sequencing: Approximately up to 10 hours. Time for culture: 24 hours up to 14 days.
Secondary Outcomes (2)
Time to pathogen detection
Time measured from start of analysis until arrival of results. Time for Nanopore sequencing: Approximately up to 10 hours. Time for culture: 24 hours up to 14 days.
Visual acuity
Gathered from patient charts two months after vitrectomy.
Eligibility Criteria
Eyes of adult patients with endophthalmitis
You may qualify if:
- Eyes of patients with endophthalmitis
You may not qualify if:
- No informed consent possible
- Participation in other studies
Contact the study team to confirm eligibility.
Sponsors & Collaborators
Study Sites (1)
Universitäts Augenklinik Graz
Graz, Styria, 8036, Austria
Biospecimen
Vitreous and aqueous humor samples in eyes with endophthalmitis gathered during vitrectomy.
MeSH Terms
Conditions
Condition Hierarchy (Ancestors)
Central Study Contacts
Study Design
- Study Type
- observational
- Observational Model
- CASE ONLY
- Time Perspective
- PROSPECTIVE
- Sponsor Type
- OTHER
- Responsible Party
- SPONSOR
Study Record Dates
First Submitted
April 22, 2022
First Posted
May 13, 2022
Study Start
April 22, 2022
Primary Completion (Estimated)
December 1, 2026
Study Completion (Estimated)
December 1, 2027
Last Updated
September 30, 2025
Record last verified: 2025-09
Data Sharing
- IPD Sharing
- Will not share