Genetic Pathways Leading to Fatty Liver and Atherogenic Dyslipidemia
VARKIN
Genetic Regulation of Lipid Pathways Contributing to Non-alcoholic Fatty Liver and Atherogenic Dyslipidemia
1 other identifier
observational
100
2 countries
2
Brief Summary
The aims of the study are:
- 1.To investigate if carriers of apolipoprotein (apo) CIII loss-of-function (LOF) mutations produce less apo-CIII that results in reduction of large very low-density lipoprotein (VLDL) particle secretion as compared to non-carriers of these variants and compare the results with carriers of apo-CIII gain-of-function (GOF) to elucidate the role of apo-CIII in hepatic lipid metabolism.
- 2.To study if carriers of the TM6SF2 E167K and PNLPLA3 I148M mutations produce less large VLDL particles to transport fat out of the liver as compared to non-carriers.
- 3.To test whether the specific mutations in the apo-CIII, TM6SF2 and PNLPLA3 genes are reflected in changes of liver de novo lipogenesis (DNL), liver fat, Homeostatic Model Assessment for Insulin Resistance (HOMA-IR), plasma lipid and apolipoprotein kinetics and fasting concentrations in carriers of the TM6SF2 E167K and PNLPLA3 I148M mutations as compared to non-carriers.
- 4.To study the effects of APOE, angiopoietin (ANGPTL3 and ANGPTL8) or endothelial lipase (LIPG) genotypes on liver fat metabolism, lipid and apolipoprotein metabolism and lipid phenotypes.
Trial Health
Trial Health Score
Automated assessment based on enrollment pace, timeline, and geographic reach
participants targeted
Target at P50-P75 for all trials
Started Dec 2019
Longer than P75 for all trials
2 active sites
Health score is calculated from publicly available data and should be used for screening purposes only.
Trial Relationships
Click on a node to explore related trials.
Study Timeline
Key milestones and dates
Study Start
First participant enrolled
December 1, 2019
CompletedFirst Submitted
Initial submission to the registry
December 19, 2019
CompletedFirst Posted
Study publicly available on registry
December 24, 2019
CompletedPrimary Completion
Last participant's last visit for primary outcome
June 1, 2024
CompletedStudy Completion
Last participant's last visit for all outcomes
December 1, 2028
ExpectedSeptember 22, 2023
September 1, 2023
4.5 years
December 19, 2019
September 21, 2023
Conditions
Keywords
Outcome Measures
Primary Outcomes (18)
Difference in the rate of production of VLDL Apo B
Production rate, mg/day
Baseline
Difference in the rate of production of VLDL Triglycerides
Production rate, mg/kg/day
Baseline
Difference in the rate of production of VLDL ApoC-III and apoE
Production rate, mg/kg/day
Baseline
Difference in the Fractional Catabolic Rate of VLDL Apo B
Rate of disappearance, pools/day
Baseline
Difference in the Fractional Catabolic Rate of VLDL Triglycerides
Rate of disappearance, pools/day
Baseline
Difference in the Fractional Catabolic Rate of VLDL ApoC-III and apoE
Rate of disappearance, pools/day
Baseline
Difference in de novo lipogenesis
Measure of newly synthesized triglycerides in VLDL, μmol/l
Baseline
Difference in liver fat
Percentage of liver fat measured with magnetic resonance spectroscopy
Baseline
Difference in atherogenic dyslipidemia
Remnant lipoproteins and lipoprotein fraction composition, mg/L
Baseline
Difference in insulin resistance
Calculated Homeostatic Model Assessment for Insulin Resistance (HOMA-IR)
Baseline
Difference in apoprotein A concentration
ApoA, mg/dl
Baseline
Difference in apoprotein B concentration
ApoB, mg/dl
Baseline
Difference in apoprotein C concentration
ApoC, mg/dl
Baseline
Difference in apoprotein E concentration
ApoE, mg/dl
Baseline
Difference in the rate of production and Fractional Catabolic Rate of intermediate-density Apo B
Rate of turnover, pools/day
Baseline
Difference in the rate of production and Fractional Catabolic Rate of low-density lipoprotein Apo B
Rate of turnover, pools/day
Baseline
Lipolytic activity
Measured lipoprotein lipase activity, mU/ml
Baseline
Hepatic lipase activity
Measured hepatic lipase activity, mU/ml
Baseline
Study Arms (8)
ApoC-III LOF
Carriers of apo-CIII loss-of-function mutation
ApoC-III GOF
Carriers of apo-CIII gain-of-function mutation
TM6SF2-KK
Carriers of TM6SF2 E167K mutation
PNLPLA3-MM
Carriers of PNLPLA3 I148M mutation
Control
No ApoC-III, TM6SF2 E167K or PNLPLA3 I148M mutation
ApoE variants
Carriers of E2/2, E3/3 or E4/4 mutation
LIPG
LIPG gene LOF or GOF variant carriers
ANGPTL3 or ANGPTL8
ANGPTL3 and ANGPTL8 gene LOF or GOF variant carriers
Interventions
Lipoprotein kinetic apply protocol that endogenously label proteins and fatty acids with stable isotope-labeled amino acid and glycerol tracers. De novo lipogenesis is measured after ingestion of deuterated water to measure newly formed fatty acids in VLDL. Liver fat is measured with magnetic resonance spectroscopy and lipolytic enzymes with heparin test.
Eligibility Criteria
Ambulatory outpatients who are recruited from our previous study investigating familial dyslipidemia where exome sequency has been performed to explore genes involved in lipid metabolism (HUCH Ethics Committee, Department of Medicine: 108/1996, follow-up studies Dnro 170/E5/02, Drno 215/13/03/01/2009, Drno 144/13/03/01/2011 and HUCH Coordinating Ethics Committee Drno 184/13/03/00/2012, and Drno 183/13/03/00/2012). All subjects who have given oral consent that they can be informed about new studies focused on lipid metabolism will be contacted. To recruite the subjects we will use the invitation letter and follow up all the policy as stipulated in the Finnish biobank law (688/2012) (http//nationalbiobanks.fi/index.php./studies2/7-finrisk).
You may qualify if:
- persons who have provided written consent
- apo-CIII loss-of-function mutation (heterozygous) or apo-CIII gain-of-function mutations (heterozygous) or TM6SF2 E167K mutation (homozygous) or PNLPLA3 I148M or apoE or LIPG or ANGPTL3 or ANGPTL8 LOF and GOF variants. Control group without any of known risk variants in these genes.
- Hemoglobin A1c \< 6.5%
- Body mass index between 18.5 and 40 kg/m²
You may not qualify if:
- Patients with Type 1 and 2 diabetes, BMI \> 40 kg/m2,
- ApoE2/2 phenotype, thyrotropin concentration outside normal range,
- Lipid-lowering drugs
- Blood pressure \>160 mmHg systolic and/or \> 105 diastolic mmHg
- Liver failure or abnormal liver function tests \>3 x upper limit of normal
- Intestinal disease
- Pregnancy, breastfeeding
- Patients with volume depletion
Contact the study team to confirm eligibility.
Sponsors & Collaborators
- Marja-Riitta Taskinenlead
- Göteborg Universitycollaborator
Study Sites (2)
RPU Clinical and Molecular Metabolism, Biomedicum
Helsinki, Finland
Wallenberg Laboratory
Gothenburg, Sweden
Related Publications (1)
Taskinen MR, Bjornson E, Matikainen N, Soderlund S, Ramo J, Ainola MM, Hakkarainen A, Sihlbom C, Thorsell A, Andersson L, Bergh PO, Henricsson M, Romeo S, Adiels M, Ripatti S, Laakso M, Packard CJ, Boren J. Postprandial metabolism of apolipoproteins B48, B100, C-III, and E in humans with APOC3 loss-of-function mutations. JCI Insight. 2022 Oct 10;7(19):e160607. doi: 10.1172/jci.insight.160607.
PMID: 36040803DERIVED
Biospecimen
Plasma and serum samples
MeSH Terms
Conditions
Condition Hierarchy (Ancestors)
Study Design
- Study Type
- observational
- Observational Model
- CASE CONTROL
- Time Perspective
- CROSS SECTIONAL
- Sponsor Type
- OTHER
- Responsible Party
- SPONSOR INVESTIGATOR
- PI Title
- Professor
Study Record Dates
First Submitted
December 19, 2019
First Posted
December 24, 2019
Study Start
December 1, 2019
Primary Completion
June 1, 2024
Study Completion (Estimated)
December 1, 2028
Last Updated
September 22, 2023
Record last verified: 2023-09