One Sequencing Find All for Helicobacter Pylori Infection
Development of Prediction Model of Treatment Outcome of Helicobacter Pylori Eradication Through "One Sequencing Find All" Approach: With Whole Exome Sequencing for Host and Target Sequencing for Bacteria at Once
1 other identifier
observational
60
1 country
1
Brief Summary
The aim of this study is to Identify antibiotic resistance gene mutations in Helicobacter pylori (HP) and genetic diversity of drug metabolism for antibiotics and proton pump inhibitors (PPIs) in patients with HP infection using next-generation sequencing (NGS). The mutation of host/HP strain will be investigated by single NGS, and the eradication results according to genetic polymorphism of host/HP strain will be analyzed.
Trial Health
Trial Health Score
Automated assessment based on enrollment pace, timeline, and geographic reach
participants targeted
Target at P25-P50 for all trials
Started May 2019
Shorter than P25 for all trials
1 active site
Health score is calculated from publicly available data and should be used for screening purposes only.
Trial Relationships
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Study Timeline
Key milestones and dates
First Submitted
Initial submission to the registry
February 11, 2019
CompletedFirst Posted
Study publicly available on registry
February 12, 2019
CompletedStudy Start
First participant enrolled
May 1, 2019
CompletedPrimary Completion
Last participant's last visit for primary outcome
December 31, 2019
CompletedStudy Completion
Last participant's last visit for all outcomes
December 31, 2019
CompletedMay 14, 2019
February 1, 2019
8 months
February 11, 2019
May 12, 2019
Conditions
Keywords
Outcome Measures
Primary Outcomes (1)
Eradication rate of HP infection
intent to treat and per protocol analysis
12 months
Interventions
Eradication therapy includes the administration of a proton pump inhibitor (PPI) and antibiotics. Triple therapy with a PPI (lansoprazole or esomeprazole), clarithromycin, and amoxicillin is the first-line regimen. Quadruple therapy with a PPI, bismuth, metronidazole, and tetracyclin is the second-line therapy.
Eligibility Criteria
H. pylori-positive healthy patients
You may qualify if:
- Age over 18 years old
- CLO test positive
- Findings of gastric ulcer, atrophic gastritis on gastroduodenoscopy
- Agreed to HP eradication therapy and accept to follow-up
- Agreed to participating in the study
You may not qualify if:
- History of previous HP eradication treatment
- History of partial gastrectomy
Contact the study team to confirm eligibility.
Sponsors & Collaborators
Study Sites (1)
Seoul National University Boramae Medical Center
Seoul, Seoul, 138-736, South Korea
Related Publications (3)
Graham DY, Fischbach L. Helicobacter pylori treatment in the era of increasing antibiotic resistance. Gut. 2010 Aug;59(8):1143-53. doi: 10.1136/gut.2009.192757. Epub 2010 Jun 4.
PMID: 20525969BACKGROUNDSugimoto M, Furuta T. Efficacy of tailored Helicobacter pylori eradication therapy based on antibiotic susceptibility and CYP2C19 genotype. World J Gastroenterol. 2014 Jun 7;20(21):6400-11. doi: 10.3748/wjg.v20.i21.6400.
PMID: 24914361BACKGROUNDMalfertheiner P, Megraud F, O'Morain CA, Gisbert JP, Kuipers EJ, Axon AT, Bazzoli F, Gasbarrini A, Atherton J, Graham DY, Hunt R, Moayyedi P, Rokkas T, Rugge M, Selgrad M, Suerbaum S, Sugano K, El-Omar EM; European Helicobacter and Microbiota Study Group and Consensus panel. Management of Helicobacter pylori infection-the Maastricht V/Florence Consensus Report. Gut. 2017 Jan;66(1):6-30. doi: 10.1136/gutjnl-2016-312288. Epub 2016 Oct 5.
PMID: 27707777BACKGROUND
Biospecimen
Gastric mucosal tissue sample will be used by remnant tissue of CLO test during gastroduodenoscopy. To protect information of participants, we plan to encrypt/anonymize all identifiers of the subjects and store them in a separate database. Whole genome data will be stored in the database of the laboratory of Seoul National University Hospital, and the patient's medical record information (EMR data) will be stored separately.
Study Officials
- STUDY DIRECTOR
Ju Han Kim, MD
Division of Biomedical Informatics,Seoul National University College of Medicine
Central Study Contacts
Study Design
- Study Type
- observational
- Observational Model
- CASE ONLY
- Time Perspective
- PROSPECTIVE
- Sponsor Type
- OTHER
- Responsible Party
- SPONSOR
Study Record Dates
First Submitted
February 11, 2019
First Posted
February 12, 2019
Study Start
May 1, 2019
Primary Completion
December 31, 2019
Study Completion
December 31, 2019
Last Updated
May 14, 2019
Record last verified: 2019-02
Data Sharing
- IPD Sharing
- Will not share