A Prospective Study to Evaluate the Consistency of Next-Generation Sequencing(NGS)-Panels by Using Malignant Hydrothorax Form NSCLC
1 other identifier
observational
50
1 country
1
Brief Summary
A prospective study to evaluate consistency of different NGS-panel. Cell free DNA is purified from each malignant hydrothorax from NSCLC .Different NGS-panels are applied to perform in vitro diagnosis to detect Single Nucleotide Variants(SNV) and to calculate TMB value in these DNA samples.Consistency of enrolled NGS-panels are then evaluated by statistical analysis.
Trial Health
Trial Health Score
Automated assessment based on enrollment pace, timeline, and geographic reach
participants targeted
Target at P25-P50 for all trials
Started May 2018
Shorter than P25 for all trials
1 active site
Health score is calculated from publicly available data and should be used for screening purposes only.
Trial Relationships
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Study Timeline
Key milestones and dates
Study Start
First participant enrolled
May 18, 2018
CompletedFirst Submitted
Initial submission to the registry
May 22, 2018
CompletedFirst Posted
Study publicly available on registry
June 6, 2018
CompletedPrimary Completion
Last participant's last visit for primary outcome
September 30, 2018
CompletedStudy Completion
Last participant's last visit for all outcomes
May 1, 2019
CompletedJune 7, 2018
June 1, 2018
5 months
May 22, 2018
June 5, 2018
Conditions
Keywords
Outcome Measures
Primary Outcomes (1)
Evaluate consistency of TMB value of different NGS-Panel
All DNA samples were tested to calculate TMB value by all enrolled NGS-panel (include WES if necessary), each sample is then to be marked as TMB high, TMB median or TMB low according to the cutoff value identified by different IVD enterprises. Employ Cohen's kappa test to calculate the kappa value to measures inter-rater agreement for categorical result.
5 months
Study Arms (1)
malignant NSCLC hydrothorax
cell free DNA ,which is purified from malignant NSCLC hydrothorax, tested by in vitro NGS-panel
Interventions
cell free DNA ,which was purified from hydrothorax, is used to be tested by NGS-panel
Eligibility Criteria
patients in shanghai chest hospital
You may qualify if:
- Advanced malignant lung cancer, with treatment of pleural effusion, hydrothorax volume not less than 800ml
You may not qualify if:
- The sample size is not sufficient to detect.
- There are not enough tumor cells in the tissue section to be evaluated through the pathology department of the chest Hospital.
Contact the study team to confirm eligibility.
Sponsors & Collaborators
- Shanghai Chest Hospitallead
- Sinotech Genomics Co., Ltdcollaborator
- Amoy Diagnosticscollaborator
- Guangzhou Burning Rock Medical Examination Institute Co., Ltd.collaborator
- Geneplus-Beijing Co. Ltd.collaborator
- Berry Genomics Co., Ltd.collaborator
Study Sites (1)
Shangha Chest Hospital
Shanghai, Shanghai Municipality, 200030, China
Biospecimen
cell block obtain from malignant NSCLC hydrothorax
Study Officials
- PRINCIPAL INVESTIGATOR
shun lu, Prof.
Shanghai Chest Hospital
Central Study Contacts
Study Design
- Study Type
- observational
- Observational Model
- CASE ONLY
- Time Perspective
- PROSPECTIVE
- Sponsor Type
- OTHER
- Responsible Party
- PRINCIPAL INVESTIGATOR
- PI Title
- Shanghai Chest Hospital
Study Record Dates
First Submitted
May 22, 2018
First Posted
June 6, 2018
Study Start
May 18, 2018
Primary Completion
September 30, 2018
Study Completion
May 1, 2019
Last Updated
June 7, 2018
Record last verified: 2018-06