Transcriptomic Signatures in Gastric Adenocarcinoma
GAC
Exploring the Transcriptomic Signatures and Their Relevance in Gastric Adenocarcinoma
1 other identifier
observational
48
1 country
1
Brief Summary
Gastric Adenocarcinoma (GAC) accounting for the major percentage of all stomach malignancies is associated with a poor overall survival of 25-30% despite the advancement in treatment strategies. Several factors associated with tumor microenvironment (TME) are thought to play an important role in tumorigenesis and acquired chemoresistance to therapies that are not otherwise addressed by the comprehensive molecular classification of GAC given by TCGA and ACRG. In the present study investigators intend to do transcriptome profiling of GAC tumor tissue and adjacent normal tissue to investigate differentially expressed genes between the two in relation to TME which might help in identification of gene signatures that are clinically relevant with survival outcome in Gastric Adenocarcinoma.
Trial Health
Trial Health Score
Automated assessment based on enrollment pace, timeline, and geographic reach
participants targeted
Target at P25-P50 for all trials
Started Aug 2021
Longer than P75 for all trials
1 active site
Health score is calculated from publicly available data and should be used for screening purposes only.
Trial Relationships
Click on a node to explore related trials.
Study Timeline
Key milestones and dates
Study Start
First participant enrolled
August 6, 2021
CompletedFirst Submitted
Initial submission to the registry
March 31, 2022
CompletedFirst Posted
Study publicly available on registry
April 8, 2022
CompletedPrimary Completion
Last participant's last visit for primary outcome
April 6, 2025
CompletedStudy Completion
Last participant's last visit for all outcomes
October 6, 2025
CompletedApril 15, 2022
April 1, 2022
3.7 years
March 31, 2022
April 8, 2022
Conditions
Keywords
Outcome Measures
Primary Outcomes (4)
Transcriptome profiling of Gastric adenocarcinoma
To obtain gene expression data of cancerous and normal tissue through RNA - sequencing
Range of 6 months to 5 years of patient recruitment
Differential gene expression analysis in Gastric adenocarcinoma
To determine differentially expressed gene between tumor and normal tissue through bioinformatic analysis of gene expression data
Range of 6 months to 5 years of patient recruitment
Influence of tumor microenvironment on gene expression profile of gastric adenocarcinoma
To identify tumor microenvironment related genes and their functional annotation using bioinformatic packages
Range of 6 months to 5 years of patient recruitment
Correlation of tumor microenvironment related genes with patient's clinical features
To correlate differentially expressed tumor microenvironment related gene with outcome in patients to identify genes significantly related with overall survival
Range of 6 months to 5 years of patient recruitment
Secondary Outcomes (1)
Patient risk stratification based on correlation between gene expression and overall survival
Range of 6 months to 5 years of patient recruitment
Study Arms (1)
Patients with Gastric Adenocarcinoma
Patients with origin of tumor in distal part of stomach who underwent total or partial gastrectomy after biopsy examination with availability of follow-up and archived FFPE tissue will be considered for this study.
Interventions
Exploration of transcriptomic signatures related to tumor microenvironment having a significant role in prognosis of gastric adenocarcinoma patients
Eligibility Criteria
Subjects diagnosed with distal Gastric Adenocarcinoma at SGPGIMS will be recruited for this study
You may qualify if:
- Patients with origin of tumor in distal part of stomach
- Patients who underwent Total or partial Gastrectomy after Biopsy examination
- Availability of follow up in Radiotherapy or Gastro department
- Availability of FFPE gastrectomy specimen tissue of selected cases in Histopathology
You may not qualify if:
- Patients with origin of tumor in proximal part of stomach
- Patients with only biopsy available
- Patients whose follow-up is not available
- Unavailability of FFPE tissue blocks
Contact the study team to confirm eligibility.
Sponsors & Collaborators
Study Sites (1)
Sanjay Gandhi Postgraduate Institute of Medical Sciences
Lucknow, Uttar Pradesh, 226014, India
Related Publications (6)
Ahn B, Chae YS, Kim CH, Lee Y, Lee JH, Kim JY. Tumor microenvironmental factors have prognostic significances in advanced gastric cancer. APMIS. 2018 Oct;126(10):814-821. doi: 10.1111/apm.12889.
PMID: 30264431BACKGROUNDZhang S, Zeng Z, Liu Y, Huang J, Long J, Wang Y, Peng X, Hu Z, Ouyang Y. Prognostic landscape of tumor-infiltrating immune cells and immune-related genes in the tumor microenvironment of gastric cancer. Aging (Albany NY). 2020 Sep 23;12(18):17958-17975. doi: 10.18632/aging.103519. Epub 2020 Sep 23.
PMID: 32969836BACKGROUNDQiu XT, Song YC, Liu J, Wang ZM, Niu X, He J. Identification of an immune-related gene-based signature to predict prognosis of patients with gastric cancer. World J Gastrointest Oncol. 2020 Aug 15;12(8):857-876. doi: 10.4251/wjgo.v12.i8.857.
PMID: 32879664BACKGROUNDRen N, Liang B, Li Y. Identification of prognosis-related genes in the tumor microenvironment of stomach adenocarcinoma by TCGA and GEO datasets. Biosci Rep. 2020 Oct 30;40(10):BSR20200980. doi: 10.1042/BSR20200980.
PMID: 33015704BACKGROUNDCai WY, Dong ZN, Fu XT, Lin LY, Wang L, Ye GD, Luo QC, Chen YC. Identification of a Tumor Microenvironment-relevant Gene set-based Prognostic Signature and Related Therapy Targets in Gastric Cancer. Theranostics. 2020 Jul 9;10(19):8633-8647. doi: 10.7150/thno.47938. eCollection 2020.
PMID: 32754268BACKGROUNDLi T, Gao X, Han L, Yu J, Li H. Identification of hub genes with prognostic values in gastric cancer by bioinformatics analysis. World J Surg Oncol. 2018 Jun 19;16(1):114. doi: 10.1186/s12957-018-1409-3.
PMID: 29921304BACKGROUND
Biospecimen
Surgically resected fresh tissue samples and FFPE blocks of surgical specimens from gastric adenocarcinoma patients
MeSH Terms
Conditions
Condition Hierarchy (Ancestors)
Study Officials
- PRINCIPAL INVESTIGATOR
Raghavendra Lingaiah
SGPGIMS
Central Study Contacts
Study Design
- Study Type
- observational
- Observational Model
- CASE ONLY
- Time Perspective
- PROSPECTIVE
- Target Duration
- 2 Years
- Sponsor Type
- OTHER GOV
- Responsible Party
- PRINCIPAL INVESTIGATOR
- PI Title
- Assistant professor (Clinical chemistry)
Study Record Dates
First Submitted
March 31, 2022
First Posted
April 8, 2022
Study Start
August 6, 2021
Primary Completion
April 6, 2025
Study Completion
October 6, 2025
Last Updated
April 15, 2022
Record last verified: 2022-04
Data Sharing
- IPD Sharing
- Will not share