Association of Autophagy-related Genes ,LncRNA and SNPs With Colorectal Cancer in Egyptian Population
1 other identifier
observational
60
1 country
1
Brief Summary
- 1.Determination of expression level of HOTTIP and EIF4EBP1(Eukaryotic translation initiation factor 4E-binding protein 1) .
- 2.Investigation of the SNP HOTTIP rs1859168 and it's association with CRC susceptibility.
- 3.Correlation of the expression of these genes with various stages of CRC to determine the prognostic value of each of them.
Trial Health
Trial Health Score
Automated assessment based on enrollment pace, timeline, and geographic reach
participants targeted
Target at P25-P50 for all trials
Started Apr 2022
Typical duration for all trials
1 active site
Health score is calculated from publicly available data and should be used for screening purposes only.
Trial Relationships
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Study Timeline
Key milestones and dates
First Submitted
Initial submission to the registry
January 24, 2021
CompletedFirst Posted
Study publicly available on registry
January 29, 2021
CompletedStudy Start
First participant enrolled
April 15, 2022
CompletedPrimary Completion
Last participant's last visit for primary outcome
May 20, 2023
CompletedStudy Completion
Last participant's last visit for all outcomes
September 20, 2024
CompletedApril 30, 2025
April 1, 2025
1.1 years
January 24, 2021
April 27, 2025
Conditions
Keywords
Outcome Measures
Primary Outcomes (1)
HOTTIP gene expression
Estimation of expression level of HOTTIP in peripheral blood mononuclear cells and tissue aiming to use as possible less invasive prognostic markers for colorectal cancer.
2 years
Secondary Outcomes (1)
EIF4EBP
2 years
Study Arms (2)
colorectal cancer patients
Colorectal cancer patients( n = 30 ) from stage I-III with the following criteria:- a. Inclusion criteria: * No sex predilection. * Age (25-65 yr). * Colorectal carcinoma confirmed by histopathological examination
Healthy controls ( n = 30)
matched as regarding age and sex as much as possible with cases.
Interventions
5 ml fresh blood sample, normal and CRC tissue
Eligibility Criteria
Healthy controls ( n = 30) matched as regarding age and sex as much as possible with cases. -Colorectal cancer patients( n = 30 ) from stage I-III with the following criteria:-
You may qualify if:
- No sex predilection.
- Age (25-65 yr).
- Colorectal carcinoma confirmed by histopathological examination
You may not qualify if:
- patients who received any treatment.
- Cases with other organ cancers.
- History of chemotherapy and radiotherapy.
- Systemic diseases such as renal failure, diabetes mellitus, and hypertension.
Contact the study team to confirm eligibility.
Sponsors & Collaborators
- Esraa Hassan,MDlead
- South Egypt Cancer Institutecollaborator
Study Sites (1)
Assiut University
Asyut, Egypt
Related Publications (14)
Chisanga D, Keerthikumar S, Pathan M, Ariyaratne D, Kalra H, Boukouris S, Mathew NA, Al Saffar H, Gangoda L, Ang CS, Sieber OM, Mariadason JM, Dasgupta R, Chilamkurti N, Mathivanan S. Colorectal cancer atlas: An integrative resource for genomic and proteomic annotations from colorectal cancer cell lines and tissues. Nucleic Acids Res. 2016 Jan 4;44(D1):D969-74. doi: 10.1093/nar/gkv1097. Epub 2015 Oct 22.
PMID: 26496946BACKGROUNDVorobiova OA. [Participation of the supraoptic nucleus of the anterior hypothalamus in controlling the gonadotropic functions of the pituitary]. Fiziol Zh. 1974 May-Jun;20(3):334-8. No abstract available. Ukrainian.
PMID: 4466671BACKGROUNDKatheder NS, Khezri R, O'Farrell F, Schultz SW, Jain A, Rahman MM, Schink KO, Theodossiou TA, Johansen T, Juhasz G, Bilder D, Brech A, Stenmark H, Rusten TE. Microenvironmental autophagy promotes tumour growth. Nature. 2017 Jan 19;541(7637):417-420. doi: 10.1038/nature20815. Epub 2017 Jan 11.
PMID: 28077876BACKGROUNDRahman MA, Rhim H. Therapeutic implication of autophagy in neurodegenerative diseases. BMB Rep. 2017 Jul;50(7):345-354. doi: 10.5483/bmbrep.2017.50.7.069.
PMID: 28454606BACKGROUNDUddin MS, Stachowiak A, Mamun AA, Tzvetkov NT, Takeda S, Atanasov AG, Bergantin LB, Abdel-Daim MM, Stankiewicz AM. Autophagy and Alzheimer's Disease: From Molecular Mechanisms to Therapeutic Implications. Front Aging Neurosci. 2018 Jan 30;10:04. doi: 10.3389/fnagi.2018.00004. eCollection 2018.
PMID: 29441009BACKGROUNDAvalos Y, Canales J, Bravo-Sagua R, Criollo A, Lavandero S, Quest AF. Tumor suppression and promotion by autophagy. Biomed Res Int. 2014;2014:603980. doi: 10.1155/2014/603980. Epub 2014 Sep 18.
PMID: 25328887BACKGROUNDAbdullah LN, Chow EK. Mechanisms of chemoresistance in cancer stem cells. Clin Transl Med. 2013 Jan 17;2(1):3. doi: 10.1186/2001-1326-2-3.
PMID: 23369605BACKGROUNDOjha R, Bhattacharyya S, Singh SK. Autophagy in Cancer Stem Cells: A Potential Link Between Chemoresistance, Recurrence, and Metastasis. Biores Open Access. 2015 Jan 1;4(1):97-108. doi: 10.1089/biores.2014.0035. eCollection 2015.
PMID: 26309786BACKGROUNDCha YL, Li PD, Yuan LJ, Zhang MY, Zhang YJ, Rao HL, Zhang HZ, Zheng XF, Wang HY. EIF4EBP1 overexpression is associated with poor survival and disease progression in patients with hepatocellular carcinoma. PLoS One. 2015 Feb 6;10(2):e0117493. doi: 10.1371/journal.pone.0117493. eCollection 2015.
PMID: 25658620BACKGROUNDBonasio R, Shiekhattar R. Regulation of transcription by long noncoding RNAs. Annu Rev Genet. 2014;48:433-55. doi: 10.1146/annurev-genet-120213-092323. Epub 2014 Sep 18.
PMID: 25251851BACKGROUNDWang KC, Yang YW, Liu B, Sanyal A, Corces-Zimmerman R, Chen Y, Lajoie BR, Protacio A, Flynn RA, Gupta RA, Wysocka J, Lei M, Dekker J, Helms JA, Chang HY. A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression. Nature. 2011 Apr 7;472(7341):120-4. doi: 10.1038/nature09819. Epub 2011 Mar 20.
PMID: 21423168BACKGROUNDLv Z, Xu Q, Yuan Y. A systematic review and meta-analysis of the association between long non-coding RNA polymorphisms and cancer risk. Mutat Res Rev Mutat Res. 2017 Jan-Mar;771:1-14. doi: 10.1016/j.mrrev.2016.10.002. Epub 2016 Nov 5.
PMID: 28342449BACKGROUNDHu P, Qiao O, Wang J, Li J, Jin H, Li Z, Jin Y. rs1859168 A > C polymorphism regulates HOTTIP expression and reduces risk of pancreatic cancer in a Chinese population. World J Surg Oncol. 2017 Aug 17;15(1):155. doi: 10.1186/s12957-017-1218-0.
PMID: 28818070BACKGROUNDShang A, Wang W, Gu C, Chen C, Zeng B, Yang Y, Ji P, Sun J, Wu J, Lu W, Sun Z, Li D. Correction to: Long non-coding RNA HOTTIP enhances IL-6 expression to potentiate immune escape of ovarian cancer cells by upregulating the expression of PD-L1 in neutrophils. J Exp Clin Cancer Res. 2020 Dec 4;39(1):272. doi: 10.1186/s13046-020-01755-z.
PMID: 33272287BACKGROUND
Biospecimen
EDTA (ethylene diamine tetra acetic acid)coated fresh blood sample
MeSH Terms
Conditions
Condition Hierarchy (Ancestors)
Study Officials
- PRINCIPAL INVESTIGATOR
Esraa H Mohamed, Master
Assistant lecturer of Medical Microbiology and Immunology
Study Design
- Study Type
- observational
- Observational Model
- CASE CONTROL
- Time Perspective
- CROSS SECTIONAL
- Sponsor Type
- OTHER
- Responsible Party
- SPONSOR INVESTIGATOR
- PI Title
- Principle investigator
Study Record Dates
First Submitted
January 24, 2021
First Posted
January 29, 2021
Study Start
April 15, 2022
Primary Completion
May 20, 2023
Study Completion
September 20, 2024
Last Updated
April 30, 2025
Record last verified: 2025-04