Atlas of Experimental Gingivitis in Humans
ATL
An Atlas of Experimental Gingivitis in Humans at Single Cell Resolution
1 other identifier
interventional
6
1 country
1
Brief Summary
Pilot case series with a split-mouth design to track subjects with known exposure (dental biofilm accumulation) over 21 days. Descriptive design, using single cell RNA sequencing as a "digital biopsy" to catalog and contrast inflamed versus non-inflamed tissues from within the same mouth and across patients. Specimens (human) will biobanked from the 'digital biopsy' site for future analysis, including: Gingival crevicular fluid, oral epithelial stem/progenitor cells, and plaque samples, for 'omics analyses including metabolomics, microbiomic, and genomic data.
Trial Health
Trial Health Score
Automated assessment based on enrollment pace, timeline, and geographic reach
participants targeted
Target at below P25 for not_applicable
Started Oct 2019
Shorter than P25 for not_applicable
1 active site
Health score is calculated from publicly available data and should be used for screening purposes only.
Trial Relationships
Click on a node to explore related trials.
Study Timeline
Key milestones and dates
First Submitted
Initial submission to the registry
September 24, 2019
CompletedFirst Posted
Study publicly available on registry
September 26, 2019
CompletedStudy Start
First participant enrolled
October 15, 2019
CompletedPrimary Completion
Last participant's last visit for primary outcome
December 3, 2019
CompletedStudy Completion
Last participant's last visit for all outcomes
December 3, 2019
CompletedAugust 12, 2020
August 1, 2020
2 months
September 24, 2019
August 10, 2020
Conditions
Outcome Measures
Primary Outcomes (20)
Percent Composition of Human Gingival Tissue at Day 1
Percentage of the human gingival biopsies that are epithelial, immune, or mesenchymal cells in health.
Day 1
Percent Composition of Human Gingival Tissue at Day 21
Percentage of the human gingival biopsies that are epithelial, immune, or mesenchymal cells during inflammation.
Day 21
Percent Composition of Human Gingival Epithelial Cells at Day 1
Percentage of the human gingival epithelial cell subtypes that are present (i.e. keratinocytes, Langerhans cells, etc.) in health.
Day 1
Percent Composition of Human Gingival Epithelial Cells at Day 21
Percentage of the human gingival epithelial cell subtypes that are present (i.e. keratinocytes, Langerhans cells, etc.) during inflammation.
Day 21
Percent Composition of Human Gingival Immune Cells at Day 1
Percentage of the human immune cell subtypes that are present (i.e. CD4, CD8, etc.) in health.
Day 1
Percent Composition of Human Gingival Immune Cells at Day 21
Percentage of the human immune cell subtypes that are present (i.e. CD4, CD8, etc.) during inflammation.
Day 21
Percent Composition of Human Gingival Mesenchymal Cells at Day 1
Percentage of the human mesenchymal cell subtypes that are present (i.e. stromal endothelial, etc.) in health.
Day 1
Percent Composition of Human Gingival Mesenchymal Cells at Day 21
Percentage of the human mesenchymal cell subtypes that are present (i.e. stromal endothelial, etc.) in health.
Day 21
Genes Expressed In Epithelial Cells at Day 1
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in epithelial cells in health will be produced.
Day 1
Genes Expressed In Epithelial Cells at Day 21
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in epithelial cells during inflammation will be produced.
Day 21
Genes Expressed In Immune Cells at Day 1
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in immune cells in health will be produced.
Day 1
Genes Expressed In Immune Cells at Day 21
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in immune cells during inflammation will be produced.
Day 21
Genes Expressed In Mesenchymal Cells at Day 1
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in mesenchymal cells in health will be produced.
Day 1
Genes Expressed In Mesenchymal Cells at Day 21
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in mesenchymal cells during inflammation will be produced.
Day 21
Genes Expressed In Epithelial Cell Subtypes at Day 1
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in epithelial cell subtypes in health will be produced.
Day 1
Genes Expressed In Epithelial Cell Subtypes at Day 21
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in epithelial cell subtypes during inflammation will be produced.
Day 21
Genes Expressed In Immune Cell Subtypes at Day 1
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in immune cell subtypes in health will be produced.
Day 1
Genes Expressed In Immune Cell Subtypes at Day 21
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in immune cell subtypes during inflammation will be produced.
Day 21
Genes Expressed In Mesenchymal Cell Subtypes at Day 1
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in mesenchymal cell subtypes in health will be produced.
Day 1
Genes Expressed In Mesenchymal Cell Subtypes at Day 21
Gene expression will be ranked by highest to lowest and a list of the top 100 genes in mesenchymal cell subtypes during inflammation will be produced.
Day 21
Study Arms (1)
Healthy Volunteers
EXPERIMENTALEnrolled subjects will be included in an experimental gingivitis model (SIBO) for 21 days and use an acrylic stent fabricated before and dispensed at the baseline appointment
Interventions
Customized acrylic dental (sextant) stent will be used during brushing for 21 days to influence reversible gingival tissue inflammation.
Eligibility Criteria
You may qualify if:
- Adult males or females between the age of 18 and 30 years.
- Non-diabetic and no history of smoking within the last 5 years.
- Have read, understood and signed an informed consent form.
- Must be able and willing to follow study procedures and instructions.
- Must have at least 3 natural adjacent teeth in both maxillary (top) posterior sextants that will be selected for baseline gingival biopsy and SIBO gingival biopsy.
You may not qualify if:
- Females of childbearing capacity must be willing to have pregnancy test to confirm they are not pregnant.
- History of intravenous bisphosphonates.
- Current or history (less than 5 years) of tobacco use in any form prior to enrollment (self-report)
- Chronic disease with oral manifestations including diabetes mellitus.
- Infectious disease such as hepatitis, HIV, or tuberculosis.
- Anemia or other blood dyscrasias.
- Currently taking anticoagulant therapy or drugs, such as heparin or warfarin.
- Those requiring antibiotic prophylaxis prior to dental treatment
- Exhibiting gross oral pathology or a history of periodontal disease.
- Individuals with a history or are currently using birth control containing hormones.
- Individuals without a history (less than 1 year) of regular professional oral health care, including prophylaxis. (self-report)
- Pregnant, breastfeeding or planning for pregnancy within 3 months.
- Individuals who used antibiotics/chronically used NSAIDs
- Anything that would place the individual at increased risk or preclude the individual's full compliance with or completion of the study.
Contact the study team to confirm eligibility.
Sponsors & Collaborators
- University of North Carolina, Chapel Hilllead
- Sunstar, Inc.collaborator
Study Sites (1)
Adams School of Dentistry
Chapel Hill, North Carolina, 27599, United States
MeSH Terms
Conditions
Condition Hierarchy (Ancestors)
Study Officials
- PRINCIPAL INVESTIGATOR
Kevin M Byrd, DDS, PhD
Adams School of Dentistry, UNC Chapel Hill
Study Design
- Study Type
- interventional
- Phase
- not applicable
- Allocation
- NA
- Masking
- NONE
- Purpose
- BASIC SCIENCE
- Intervention Model
- SINGLE GROUP
- Sponsor Type
- OTHER
- Responsible Party
- SPONSOR
Study Record Dates
First Submitted
September 24, 2019
First Posted
September 26, 2019
Study Start
October 15, 2019
Primary Completion
December 3, 2019
Study Completion
December 3, 2019
Last Updated
August 12, 2020
Record last verified: 2020-08
Data Sharing
- IPD Sharing
- Will share
- Time Frame
- Gene expression data will be available for download once the manuscript has been accepted for publication.
- Access Criteria
- Gene expression lists by cell types will be provided to download freely in association with available journal access.
Single-cell RNA sequencing data will be shared through the Gene Expression Omnibus (GEO), a public functional genomics data repository supporting MIAME-compliant data submissions, which accepts sequence-based data. Gene list data will be searchable, cell by cell, through an online database. The files will be deposited both as raw reads (.fastq) and differential gene expression (.txt and .xlsx). Once data have been cleaned, assessed for differential gene expression, and validated by FISH/IHC, data will be made public. This will allow us to make this data freely available for others to investigate and reanalyze for their own purposes to accelerate further discoveries.